Example outputs
===============

Here are shown the output generated for the cdk2.fasta alignment file in the examples directory.

.. toctree::
    :maxdepth: 2

    pymol_examples
    jalview_examples
    cdk2
	
For further examples of the use of Polyphony please see the examples directory in the code distribution. This contains the code used to generate the figures in `the paper <http://www.biomedcentral.com/1471-2105/15/324/abstract>`_.